lifescience
    wdl-workspace
    develop
Namespace
lifescience
Image / Tag
wdl-workspace:develop
Content Digest
sha256:18ae18b6e5e7eb7b54396b1c38a7da4134959f170d67ad85ce2f7710644eb42c
Details
Created

2019-07-19 07:25:09 UTC

Size

297 MB

Content Digest
Environment
JAVA_BASE_URL

https://github.com/AdoptOpenJDK/openjdk8-upstream-binaries/releases/download/jdk8u222-b10/OpenJDK8U-jre_

JAVA_HOME

/usr/local/openjdk-8

JAVA_URL_VERSION

8u222b10

JAVA_VERSION

8u222

LANG

C.UTF-8

PATH

/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/wdl-workspace

WDL_WORKSPACE_ROOT

/opt/wdl-workspace

Layers

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[#002] sha256:f59d6d019dd5b8398eb8d794e3fafe31f9411cc99a71dabfa587bf732b4a7385 - 1.39% (4.14 MB)

[#003] sha256:5fee445fce940c37221a2a1de8588cda557eb4cbc3f7583931e384b137762539 - 1.65% (4.89 MB)

[#004] sha256:d270185e6f4dcd4cf5d00aec5a2b5f3888c1757ca73728f988198afc8303e3cc - 0.0% (223 Bytes)

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[#011] sha256:777bc05149332e6a66425f2a9e00082050b580319ae4dea8d27b9185f6f862f8 - 11.25% (33.4 MB)

[#012] sha256:4862c4e2473827e207eba9a8154e85d6772a28d33e96ce0314af07d0de88ac31 - 54.38% (161 MB)

[#013] sha256:54156f4612b6e0100758f7ee9f005a626c02f89f255ecd66c76161ddcc7de7fd - 0.0% (1.28 KB)

History
2019-07-09 21:31:30 UTC

/bin/sh -c #(nop) ADD file:f615b611820773fd6bdf2fda01a5b2f24ca2877bd63fa0abd274985bed212e67 in /

2019-07-09 21:31:30 UTC

/bin/sh -c #(nop) CMD ["bash"]

2019-07-10 02:30:58 UTC

/bin/sh -c apt-get update && apt-get install -y --no-install-recommends ca-certificates curl netbase wget && rm -rf /var/lib/apt/lists/*

2019-07-10 02:31:05 UTC

/bin/sh -c set -ex; if ! command -v gpg > /dev/null; then apt-get update; apt-get install -y --no-install-recommends gnupg dirmngr ; rm -rf /var/lib/apt/lists/*; fi

2019-07-10 03:59:51 UTC

/bin/sh -c set -eux; apt-get update; apt-get install -y --no-install-recommends bzip2 unzip xz-utils ca-certificates p11-kit fontconfig libfreetype6 ; rm -rf /var/lib/apt/lists/*

2019-07-10 03:59:51 UTC

/bin/sh -c #(nop) ENV LANG=C.UTF-8

2019-07-10 03:59:51 UTC

/bin/sh -c #(nop) ENV JAVA_HOME=/usr/local/openjdk-8

2019-07-10 03:59:51 UTC

/bin/sh -c #(nop) ENV PATH=/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

2019-07-10 03:59:52 UTC

/bin/sh -c { echo '#/bin/sh'; echo 'echo "$JAVA_HOME"'; } > /usr/local/bin/docker-java-home && chmod +x /usr/local/bin/docker-java-home && [ "$JAVA_HOME" = "$(docker-java-home)" ]

2019-07-17 22:15:15 UTC

/bin/sh -c #(nop) ENV JAVA_VERSION=8u222

2019-07-17 22:15:15 UTC

/bin/sh -c #(nop) ENV JAVA_BASE_URL=https://github.com/AdoptOpenJDK/openjdk8-upstream-binaries/releases/download/jdk8u222-b10/OpenJDK8U-jre_

2019-07-17 22:15:15 UTC

/bin/sh -c #(nop) ENV JAVA_URL_VERSION=8u222b10

2019-07-17 22:15:22 UTC

/bin/sh -c set -eux; dpkgArch="$(dpkg --print-architecture)"; case "$dpkgArch" in amd64) upstreamArch='x64' ;; arm64) upstreamArch='aarch64' ;; *) echo >&2 "error: unsupported architecture: $dpkgArch" ;; esac; wget -O openjdk.tgz.asc "${JAVA_BASE_URL}${upstreamArch}_linux_${JAVA_URL_VERSION}.tar.gz.sign"; wget -O openjdk.tgz "${JAVA_BASE_URL}${upstreamArch}_linux_${JAVA_URL_VERSION}.tar.gz" --progress=dot:giga; export GNUPGHOME="$(mktemp -d)"; gpg --batch --keyserver ha.pool.sks-keyservers.net --recv-keys CA5F11C6CE22644D42C6AC4492EF8D39DC13168F; gpg --batch --keyserver ha.pool.sks-keyservers.net --recv-keys EAC843EBD3EFDB98CC772FADA5CD6035332FA671; gpg --batch --list-sigs --keyid-format 0xLONG CA5F11C6CE22644D42C6AC4492EF8D39DC13168F | grep '0xA5CD6035332FA671' | grep 'Andrew Haley'; gpg --batch --verify openjdk.tgz.asc openjdk.tgz; gpgconf --kill all; rm -rf "$GNUPGHOME"; mkdir -p "$JAVA_HOME"; tar --extract --file openjdk.tgz --directory "$JAVA_HOME" --strip-components 1 --no-same-owner ; rm openjdk.tgz*; { echo '#!/usr/bin/env bash'; echo 'set -Eeuo pipefail'; echo 'if ! [ -d "$JAVA_HOME" ]; then echo >&2 "error: missing JAVA_HOME environment variable"; exit 1; fi'; echo 'cacertsFile=; for f in "$JAVA_HOME/lib/security/cacerts" "$JAVA_HOME/jre/lib/security/cacerts"; do if [ -e "$f" ]; then cacertsFile="$f"; break; fi; done'; echo 'if [ -z "$cacertsFile" ] || ! [ -f "$cacertsFile" ]; then echo >&2 "error: failed to find cacerts file in $JAVA_HOME"; exit 1; fi'; echo 'trust extract --overwrite --format=java-cacerts --filter=ca-anchors --purpose=server-auth "$cacertsFile"'; } > /etc/ca-certificates/update.d/docker-openjdk; chmod +x /etc/ca-certificates/update.d/docker-openjdk; /etc/ca-certificates/update.d/docker-openjdk; find "$JAVA_HOME/lib" -name '*.so' -exec dirname '{}' ';' | sort -u > /etc/ld.so.conf.d/docker-openjdk.conf; ldconfig; java -version

2019-07-19 07:24:52 UTC

/bin/sh -c #(nop) ARG WDL_WORKSPACE_INSTALL_ROOT=/opt/wdl-workspace

2019-07-19 07:24:52 UTC

/bin/sh -c #(nop) WORKDIR /opt/wdl-workspace

2019-07-19 07:24:53 UTC

|1 WDL_WORKSPACE_INSTALL_ROOT=/opt/wdl-workspace /bin/sh -c mkdir -p $WDL_WORKSPACE_INSTALL_ROOT/ui /workflows

2019-07-19 07:24:53 UTC

/bin/sh -c #(nop) COPY dir:7aa72b7494d05da8f56c6f6cadc8ea6c8e61dde1a2c828d17af07e33d90462b0 in /workflows/

2019-07-19 07:24:53 UTC

/bin/sh -c #(nop) COPY dir:927e31af392cae6bb255e4e9cdddaf5eaecb6ad636670ae63612dff5aa86dc6c in /opt/wdl-workspace/ui

2019-07-19 07:24:53 UTC

/bin/sh -c #(nop) COPY dir:26c946e22e217c883def2256afdae595c6637e023ec72e518b000d5734088887 in /tmp/wdl-workspace/

2019-07-19 07:25:04 UTC

|1 WDL_WORKSPACE_INSTALL_ROOT=/opt/wdl-workspace /bin/sh -c apt update && apt install -y nginx wget

2019-07-19 07:25:09 UTC

|1 WDL_WORKSPACE_INSTALL_ROOT=/opt/wdl-workspace /bin/sh -c wget -q "https://github.com/broadinstitute/cromwell/releases/download/41/cromwell-41.jar" -O cromwell.jar

2019-07-19 07:25:09 UTC

|1 WDL_WORKSPACE_INSTALL_ROOT=/opt/wdl-workspace /bin/sh -c sed -e "s,WDL_WORKSPACE_INSTALL_ROOT,$WDL_WORKSPACE_INSTALL_ROOT," /tmp/wdl-workspace/wdl-workspace.nginx.conf >> /etc/nginx/sites-available/wdl-workspace && cp /tmp/wdl-workspace/start.sh start && chmod +x start && rm -rf /tmp/wdl-workspace && rm -rf /etc/nginx/sites-enabled/default && ln -s /etc/nginx/sites-available/wdl-workspace /etc/nginx/sites-enabled/

2019-07-19 07:25:09 UTC

/bin/sh -c #(nop) ENV PATH=/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/wdl-workspace WDL_WORKSPACE_ROOT=/opt/wdl-workspace

2019-07-19 07:25:09 UTC

/bin/sh -c #(nop) CMD ["./start"]

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